Navigating the Gencove Platform
- Gencove Saas Demo
- Adding custom configurations to new projects
- Moving existing samples to another project
- How to manage user roles and permissions?
- How to create a new project?
- How do I set email notifications for my project?
General
- Can Gencove process deep sequencing data?
- Where is Gencove located?
- Where do I send my samples for sequencing?
- How do I download my data?
- How do I upload FastQ files?
- Which browser(s) does Gencove support?
Gencove Methodologies
- What is Effective Coverage?
- What program is used for genotype imputation?
- How do you impute genotypes when there are no reads at a site?
- How do you calculate contamination for a sample?
- Can I get access to the variants called directly from the BAMs before imputation?
- What does the LOWCONF filter mean for a variant?