What is it?
- If paired-end reads are uploaded, this QC checks that the read pairs in the
R2FASTQ files have the same names and are in the same order
Possible reasons for failure:
- Reads in the FASTQ pairs are not in the same order in the
- Make sure that the FASTQ files you’re uploading are sorted (i.e., have the read pairs in the same order in both files)